Qingpeng "QP" Zhang

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C. Titus BrownProfessor, UC DavisVerified email at ucdavis.edu
Adina HoweIowa State UniversityVerified email at iastate.edu
Kai XiaResearch Associate Professor, Department of Psychiatry, University of North Carolina at Chapel HillVerified email at email.unc.edu
Shanshan zhuAssociate Director, Sanofi Institute for Biomedical ResearchVerified email at sanofi.com
Lei Hou (侯磊)Assistant Professor of Medicine at Boston UniversityVerified email at bu.edu
Jason PellSoftware Engineer, IMC TradingVerified email at msu.edu
BO XIANVerified email at ucsf.edu
Rosangela Canino-KoningMichigan State UniversityVerified email at msu.edu
Jiarong GuoCenter of Microbiome Science, Ohio State UniversityVerified email at osu.edu
Camille ScottHigh Performance Computing Core Facility, University of California, DavisVerified email at ucdavis.edu
Michael R. CrusoeCommon Workflow Language project, and othersVerified email at commonwl.org
Humberto Ortiz-ZuazagaComputer Science, University of Puerto RicoVerified email at upr.edu
Shana GoffrediOccidental CollegeVerified email at oxy.edu
Robert VrijenhoekSenior Scientist (retired), Monterey Bay Aquarium Research InstituteVerified email at mbari.org
Jared SimpsonOntario Institute for Cancer ResearchVerified email at oicr.on.ca
Qi Zhou (周琦)Professor at Life Sciences Institute of Zhejiang UniversityVerified email at zju.edu.cn
Jianguo ZhangBGI-shenzhenVerified email at genomics.cn
Wen WangNorthwestern Polytechnical UniversityVerified email at nwpu.edu.cn
Luiz IrberStaff Bioinformatics Engineer, AncestryVerified email at ucdavis.edu
Fan YangNative MicrobialsVerified email at nativemicrobials.com

Qingpeng "QP" Zhang

Senior Machine Learning Engineer @ ResMed

Verified email at resmed.com - Homepage

machine learning computer science


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A Draft Sequence for the Genome of the Domesticated Silkworm (Bombyx mori) Biology Analysis Group, Q Xia, Z Zhou, C Lu, D Cheng, F Dai, B Li, ... Science 306 (5703), 1937-1940, 2004	1403	2004
The khmer software package: enabling efficient nucleotide sequence analysis MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... F1000Research 4, 2015	372	2015
A reference-free algorithm for computational normalization of shotgun sequencing data CT Brown, A Howe, Q Zhang, AB Pyrkosz, TH Brom arXiv preprint arXiv:1203.4802, 2012	257	2012
A modular network model of aging H Xue, B Xian, D Dong, K Xia, S Zhu, Z Zhang, L Hou, Q Zhang, Y Zhang, ... Molecular systems biology 3 (1), 147, 2007	204	2007
Identification of the proliferation/differentiation switch in the cellular network of multicellular organisms K Xia, H Xue, D Dong, S Zhu, J Wang, Q Zhang, L Hou, H Chen, R Tao, ... PLoS computational biology 2 (11), e145, 2006	114	2006
These are not the k-mers you are looking for: efficient online k-mer counting using a probabilistic data structure Q Zhang, J Pell, R Canino-Koning, AC Howe, CT Brown PloS one 9 (7), e101271, 2014	95	2014
Microbial community analysis with ribosomal gene fragments from shotgun metagenomes J Guo, JR Cole, Q Zhang, CT Brown, JM Tiedje Applied and Environmental Microbiology 82 (1), 157-166, 2016	84	2016
Genomic versatility and functional variation between two dominant heterotrophic symbionts of deep-sea Osedax worms SK Goffredi, H Yi, Q Zhang, JE Klann, IA Struve, RC Vrijenhoek, CT Brown The ISME Journal 8 (4), 908-924, 2014	38	2014
The khmer software package: enabling efficient nucleotide sequence analysis. F1000Res 4: 900 MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ...	33	2015
The khmer software package: enabling efficient sequence analysis M Crusoe, G Edvenson, J Fish, A Howe, E McDonald, J Nahum, ... URL http://dx. doi. org/10.6084/m9. figshare 979190, 2014	26	2014
Crossing the streams: a framework for streaming analysis of short DNA sequencing reads Q Zhang, S Awad, CT Brown PeerJ PrePrints 3, e890v1, 2015	19	2015
A reference-free algorithm for computational normalization of shotgun sequencing data. 2012 CT Brown, A Howe, Q Zhang, AB Pyrkosz, TH Brom arXiv preprint arXiv:1203.4802, 2012	12	2012
Comparative genomic analysis links karyotypic evolution with genomic evolution in the Indian Muntjac (*Muntiacus muntjak vaginalis*) Q Zhou, L Huang, J Zhang, X Zhao, Q Zhang, F Song, J Chi, F Yang, ... Chromosoma 115, 427-436, 2006	11	2006
A reference-free algorithm for computational normalization of shotgun sequencing data. arXivorg CT Brown, A Howe, Q Zhang, AB Pyrkosz, TH Brom arXiv preprint arXiv:1203.4802, 2012	7	2012
khmer k-mer counting & filtering FTW MR Crusoe, G Edvenson, J Fish, A Howe, L Irber, E McDonald, J Nahum, ...	6	2010
Metagenome Assembly and Contig Assignment Q Zhang Microbiome Analysis: Methods and Protocols, 179-192, 2018	2	2018
The khmer software package: enabling efficient sequence analysis. figshare MR Crusoe, G Edvenson, J Fish, A Howe, E McDonald, J Nahum, ...	2	2014
Metagenome Assembly and Functional Annotation A Howe, F Yang, Q Zhang Functional Metagenomics: Tools and Applications, 151-159, 2017		2017
Novel computational approaches to investigate microbial diversity Q Zhang Michigan State University, 2015		2015

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