Ryan Gutenkunst
Ryan Gutenkunst
Professor of Molecular and Cellular Biology, University of Arizona
Verified email at - Homepage
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Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data
RN Gutenkunst, RD Hernandez, SH Williamson, CD Bustamante
PLoS genetics 5 (10), e1000695, 2009
Universally sloppy parameter sensitivities in systems biology models
RN Gutenkunst, JJ Waterfall, FP Casey, KS Brown, CR Myers, JP Sethna
PLoS computational biology 3 (10), e189, 2007
Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes
X Xu, X Liu, S Ge, JD Jensen, F Hu, X Li, Y Dong, RN Gutenkunst, L Fang, ...
Nature biotechnology 30 (1), 105-111, 2012
Demographic history and rare allele sharing among human populations
S Gravel, BM Henn, RN Gutenkunst, AR Indap, GT Marth, AG Clark, F Yu, ...
Proceedings of the National Academy of Sciences 108 (29), 11983, 2011
Comparative and demographic analysis of orang-utan genomes
DP Locke, LDW Hillier, WC Warren, KC Worley, LV Nazareth, DM Muzny, ...
Nature 469 (7331), 529-533, 2011
Targets of balancing selection in the human genome
AM Andrés, MJ Hubisz, A Indap, DG Torgerson, JD Degenhardt, ...
Molecular biology and evolution 26 (12), 2755-2764, 2009
Sloppiness, robustness, and evolvability in systems biology
BC Daniels, YJ Chen, JP Sethna, RN Gutenkunst, CR Myers
Current opinion in biotechnology 19 (4), 389-395, 2008
Kinetics of Coinfection with Influenza A Virus and Streptococcus pneumoniae
AM Smith, FR Adler, RM Ribeiro, RN Gutenkunst, JL McAuley, ...
PLoS pathogens 9 (3), e1003238, 2013
Global distribution of genomic diversity underscores rich complex history of continental human populations
A Auton, K Bryc, AR Boyko, KE Lohmueller, J Novembre, A Reynolds, ...
Genome research 19 (5), 795-803, 2009
Darwinian and demographic forces affecting human protein coding genes
R Nielsen, MJ Hubisz, I Hellmann, D Torgerson, AM Andrés, ...
Genome research 19 (5), 838-849, 2009
Sloppy-model universality class and the Vandermonde matrix
JJ Waterfall, FP Casey, RN Gutenkunst, KS Brown, CR Myers, ...
Physical review letters 97 (15), 150601, 2006
A community-maintained standard library of population genetic models
JR Adrion, CB Cole, N Dukler, JG Galloway, AL Gladstein, G Gower, ...
Elife 9, e54967, 2020
Computationally efficient composite likelihood statistics for demographic inference
AJ Coffman, PH Hsieh, S Gravel, RN Gutenkunst
Molecular biology and evolution 33 (2), 591-593, 2016
Loss of amino-terminal acetylation suppresses a prion phenotype by modulating global protein folding
WM Holmes, BK Mannakee, RN Gutenkunst, TR Serio
Nature communications 5, 2014
Model-based analyses of whole-genome data reveal a complex evolutionary history involving archaic introgression in Central African Pygmies
PH Hsieh, AE Woerner, JD Wall, J Lachance, SA Tishkoff, RN Gutenkunst, ...
Genome research 26 (3), 291-300, 2016
Optimal experimental design in an epidermal growth factor receptor signalling and down-regulation model
FP Casey, D Baird, Q Feng, RN Gutenkunst, JJ Waterfall, CR Myers, ...
IET systems biology 1 (3), 190-202, 2007
Effect of 1918 PB1-F2 expression on influenza A virus infection kinetics
AM Smith, FR Adler, JL McAuley, RN Gutenkunst, RM Ribeiro, ...
PLoS computational biology 7 (2), e1001081, 2011
Sampling strategies for frequency spectrum-based population genomic inference
JD Robinson, AJ Coffman, MJ Hickerson, RN Gutenkunst
BMC Evolutionary Biology 14 (1), 254, 2014
Extracting falsifiable predictions from sloppy models
RN Gutenkunst, FP Casey, JJ Waterfall, CR Myers, JP Sethna
Annals of the New York Academy of Sciences 1115 (1), 203-211, 2007
Evidence for increased levels of positive and negative selection on the X chromosome versus autosomes in humans
KR Veeramah, RN Gutenkunst, AE Woerner, JC Watkins, MF Hammer
Molecular biology and evolution 31 (9), 2267-2282, 2014
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