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Alex Harkess
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One thousand plant transcriptomes and the phylogenomics of green plants
JH Leebens-Mack, MS Barker, EJ Carpenter, MK Deyholos, ...
Nature, 2019
1260*2019
The Amborella Genome and the Evolution of Flowering Plants
PU Victor A Albert, W Bradley Barbazuk, Joshua P Der
Science 342 (6165), 1241089, 2013
7072013
The pineapple genome and the evolution of CAM photosynthesis
R Ming, R VanBuren, CM Wai, H Tang, MC Schatz, JE Bowers, E Lyons, ...
Nature genetics 47 (12), 1435-1442, 2015
5252015
CHH islands: de novo DNA methylation in near-gene chromatin regulation in maize
JI Gent, NA Ellis, L Guo, AE Harkess, Y Yao, X Zhang, RK Dawe
Genome research 23 (4), 628-637, 2013
3262013
The asparagus genome sheds light on the origin and evolution of a young Y chromosome
A Harkess, J Zhou, C Xu, JE Bowers, R Van der Hulst, S Ayyampalayam, ...
Nature communications 8 (1), 1279, 2017
2732017
Multiple polyploidy events in the early radiation of nodulating and nonnodulating legumes
SB Cannon, MR McKain, A Harkess, MN Nelson, S Dash, MK Deyholos, ...
Molecular biology and evolution 32 (1), 193-210, 2015
2272015
Sex determination by two Y-linked genes in garden asparagus
A Harkess, K Huang, R van der Hulst, B Tissen, JL Caplan, A Koppula, ...
The Plant Cell 32 (6), 1790-1796, 2020
1142020
A kinesin-14 motor activates neocentromeres to promote meiotic drive in maize
RK Dawe, EG Lowry, JI Gent, MC Stitzer, KW Swentowsky, DM Higgins, ...
Cell 173 (4), 839-850. e18, 2018
1102018
GENESPACE tracks regions of interest and gene copy number variation across multiple genomes
JT Lovell, A Sreedasyam, ME Schranz, M Wilson, JW Carlson, A Harkess, ...
elife 11, e78526, 2022
932022
A guide to sequence your favorite plant genomes
FW Li, A Harkess
Applications in Plant Sciences 6 (3), e1030, 2018
882018
Sex‐biased gene expression in dioecious garden asparagus (Asparagus officinalis)
A Harkess, F Mercati, HY Shan, F Sunseri, A Falavigna, J Leebens‐Mack
New Phytologist 207 (3), 883-892, 2015
862015
Brassicales phylogeny inferred from 72 plastid genes: a reanalysis of the phylogenetic localization of two paleopolyploid events and origin of novel chemical defenses
PP Edger, JC Hall, A Harkess, M Tang, J Coombs, S Mohammadin, ...
American journal of botany 105 (3), 463-469, 2018
742018
Dynamic genome evolution in a model fern
DB Marchant, G Chen, S Cai, F Chen, P Schafran, J Jenkins, S Shu, ...
Nature Plants 8 (9), 1038-1051, 2022
732022
Plant 24-nt reproductive phasiRNAs from intramolecular duplex mRNAs in diverse monocots
A Kakrana, SM Mathioni, K Huang, R Hammond, L Vandivier, P Patel, ...
Genome Research 28 (9), 1333-1344, 2018
482018
Gα and regulator of G‐protein signaling (RGS) protein pairs maintain functional compatibility and conserved interaction interfaces throughout evolution despite frequent loss of …
D Hackenberg, MR McKain, SG Lee, S Roy Choudhury, T McCann, ...
New Phytologist 216 (2), 562-575, 2017
482017
Elucidation of the pathway for biosynthesis of saponin adjuvants from the soapbark tree
J Reed, A Orme, A El-Demerdash, C Owen, LBB Martin, RC Misra, ...
Science 379 (6638), 1252-1264, 2023
452023
Complex scaffold remodeling in plant triterpene biosynthesis
R De La Peņa, H Hodgson, JCT Liu, MJ Stephenson, AC Martin, C Owen, ...
Science 379 (6630), 361-368, 2023
422023
A century of sex determination in flowering plants
A Harkess, J Leebens-Mack
Journal of Heredity 108 (1), 69-77, 2017
382017
Retrotransposon proliferation coincident with the evolution of dioecy in Asparagus
A Harkess, F Mercati, L Abbate, M McKain, JC Pires, T Sala, F Sunseri, ...
G3: Genes, Genomes, Genetics, 2016
302016
Distinct kinesin motors drive two types of maize neocentromeres
KW Swentowsky, JI Gent, EG Lowry, V Schubert, X Ran, KF Tseng, ...
Genes & development 34 (17-18), 1239-1251, 2020
272020
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