Benjamin Schmid
Benjamin Schmid
Optical Imaging Centre Erlangen
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Cited by
Cited by
Fiji: an open-source platform for biological-image analysis
J Schindelin, I Arganda-Carreras, E Frise, V Kaynig, M Longair, T Pietzsch, ...
Nature methods 9 (7), 676-682, 2012
BoneJ: Free and extensible bone image analysis in ImageJ
M Doube, MM Kłosowski, I Arganda-Carreras, FP Cordelières, ...
Bone 47 (6), 1076-1079, 2010
A high-level 3D visualization API for Java and ImageJ
B Schmid, J Schindelin, A Cardona, M Longair, M Heisenberg
BMC bioinformatics 11 (1), 1-7, 2010
An integrated micro-and macroarchitectural analysis of the Drosophila brain by computer-assisted serial section electron microscopy
A Cardona, S Saalfeld, S Preibisch, B Schmid, A Cheng, J Pulokas, ...
PLoS Biol 8 (10), e1000502, 2010
Rapid 3D light-sheet microscopy with a tunable lens
FO Fahrbach, FF Voigt, B Schmid, F Helmchen, J Huisken
Optics express 21 (18), 21010-21026, 2013
A new ImageJ plug-in “ActogramJ” for chronobiological analyses
B Schmid, C Helfrich-Förster, T Yoshii
Journal of Biological Rhythms 26 (5), 464-467, 2011
High-resolution reconstruction of the beating zebrafish heart
M Mickoleit, B Schmid, M Weber, FO Fahrbach, S Hombach, ...
nature methods 11 (9), 919-922, 2014
STAT3 activation through IL-6/IL-11 in cancer-associated fibroblasts promotes colorectal tumour development and correlates with poor prognosis
C Heichler, K Scheibe, A Schmied, CI Geppert, B Schmid, S Wirtz, ...
Gut 69 (7), 1269-1282, 2020
High-speed panoramic light-sheet microscopy reveals global endodermal cell dynamics
B Schmid, G Shah, N Scherf, M Weber, K Thierbach, CP Campos, ...
Nature communications 4 (1), 1-10, 2013
IFN-γ drives inflammatory bowel disease pathogenesis through VE-cadherin–directed vascular barrier disruption
V Langer, E Vivi, D Regensburger, TH Winkler, MJ Waldner, T Rath, ...
Journal of Clinical Investigation 129 (11), 4691-4707, 2019
Hyperspectral light sheet microscopy
W Jahr, B Schmid, C Schmied, FO Fahrbach, J Huisken
Nature communications 6 (1), 1-7, 2015
Aggregated neutrophil extracellular traps resolve inflammation by proteolysis of cytokines and chemokines and protection from antiproteases
J Hahn, C Schauer, C Czegley, L Kling, L Petru, B Schmid, D Weidner, ...
The FASEB Journal 33 (1), 1401-1414, 2019
Optical tomography complements light sheet microscopy for in toto imaging of zebrafish development
A Bassi, B Schmid, J Huisken
Development 142 (5), 1016-1020, 2015
ROS‐Responsive N‐Alkylaminoferrocenes for Cancer‐Cell‐Specific Targeting of Mitochondria
V Reshetnikov, S Daum, C Janko, W Karawacka, R Tietze, C Alexiou, ...
Angewandte Chemie 130 (37), 12119-12122, 2018
3Dscript: animating 3D/4D microscopy data using a natural-language-based syntax
B Schmid, P Tripal, T Fraaß, C Kersten, B Ruder, A Grüneboom, ...
Nature methods 16 (4), 278-280, 2019
Cryptochrome-dependent and-independent circadian entrainment circuits in Drosophila
T Yoshii, C Hermann-Luibl, C Kistenpfennig, B Schmid, K Tomioka, ...
Journal of Neuroscience 35 (15), 6131-6141, 2015
Cellular site and molecular mode of synapsin action in associative learning
B Michels, Y Chen, T Saumweber, D Mishra, H Tanimoto, B Schmid, ...
Learning & Memory 18 (5), 332-344, 2011
Arginase impedes the resolution of colitis by altering the microbiome and metabolome
J Baier, M Gänsbauer, C Giessler, H Arnold, M Muske, U Schleicher, ...
The Journal of Clinical Investigation 130 (11), 2020
Neutrophil extracellular traps drive epithelial‐mesenchymal transition of human colon cancer
AM Stehr, G Wang, R Demmler, MP Stemmler, J Straube, P Tripal, ...
The Journal of pathology, 2021
Multi-scale imaging and analysis identify pan-embryo cell dynamics of germlayer formation in zebrafish
G Shah, K Thierbach, B Schmid, J Waschke, A Reade, M Hlawitschka, ...
Nature Communications 10 (1), 1-12, 2019
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