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Hazuki Takahashi
Hazuki Takahashi
RIKEN, Center for Integrative Medical Sciences, Laboratory for Transcriptome Technology
Verified email at riken.jp
Title
Cited by
Cited by
Year
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
174852012
Landscape of transcription in human cells
S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, ...
Nature 489 (7414), 101-108, 2012
58152012
The regulated retrotransposon transcriptome of mammalian cells
GJ Faulkner, Y Kimura, CO Daub, S Wani, C Plessy, KM Irvine, ...
Nature genetics 41 (5), 563-571, 2009
9212009
A user's guide to the encyclopedia of DNA elements (ENCODE)
RM Myers, J Stamatoyannopoulos, M Snyder, I Dunham, RC Hardison, ...
PLoS biology 9 (4), 2011
6882011
5′ end–centered expression profiling using cap-analysis gene expression and next-generation sequencing
H Takahashi, T Lassmann, M Murata, P Carninci
Nature protocols 7 (3), 542-561, 2012
3062012
Genome-wide analysis of promoter architecture in Drosophila melanogaster
RA Hoskins, JM Landolin, JB Brown, JE Sandler, H Takahashi, ...
Genome research 21 (2), 182-192, 2011
2912011
Chromatin signatures and retrotransposon profiling in mouse embryos reveal regulation of LINE-1 by RNA
A Fadloun, S Le Gras, B Jost, C Ziegler-Birling, H Takahashi, E Gorab, ...
Nature structural & molecular biology 20 (3), 332-338, 2013
2682013
Linking promoters to functional transcripts in small samples with nanoCAGE and CAGEscan
C Plessy, N Bertin, H Takahashi, R Simone, M Salimullah, T Lassmann, ...
Nature methods 7 (7), 528-534, 2010
1802010
Dynamic regulation of the transcription initiation landscape at single nucleotide resolution during vertebrate embryogenesis
C Nepal, Y Hadzhiev, C Previti, V Haberle, N Li, H Takahashi, ...
Genome research 23 (11), 1938-1950, 2013
1412013
CAGE (cap analysis of gene expression): a protocol for the detection of promoter and transcriptional networks
H Takahashi, S Kato, M Murata, P Carninci
Gene Regulatory Networks: Methods and Protocols, 181-200, 2012
1232012
SINEUPs are modular antisense long non-coding RNAs that increase synthesis of target proteins in cells
S Zucchelli, F Fasolo, R Russo, L Cimatti, L Patrucco, H Takahashi, ...
Frontiers in cellular neuroscience 9, 174, 2015
1152015
SINEUPs: A new class of natural and synthetic antisense long non-coding RNAs that activate translation
S Zucchelli, D Cotella, H Takahashi, C Carrieri, L Cimatti, F Fasolo, ...
RNA biology 12 (8), 771-779, 2015
1042015
The status of the human gene catalogue
P Amaral, S Carbonell-Sala, FM De La Vega, T Faial, A Frankish, ...
Nature 622 (7981), 41-47, 2023
962023
Systematic assessment of long-read RNA-seq methods for transcript identification and quantification
FJ Pardo-Palacios, D Wang, F Reese, M Diekhans, S Carbonell-Sala, ...
Nature methods, 1-15, 2024
872024
Engineering mammalian cell factories with SINEUP noncoding RNAs to improve translation of secreted proteins
L Patrucco, A Chiesa, MF Soluri, F Fasolo, H Takahashi, P Carninci, ...
Gene 569 (2), 287-293, 2015
512015
SINEUP long non-coding RNA acts via PTBP1 and HNRNPK to promote translational initiation assemblies
N Toki, H Takahashi, H Sharma, MNZ Valentine, FUM Rahman, ...
Nucleic acids research 48 (20), 11626-11644, 2020
482020
Regional differences in gene expression and promoter usage in aged human brains
LM Pardo, P Rizzu, M Francescatto, M Vitezic, GGR Leday, JS Sanchez, ...
Neurobiology of aging 34 (7), 1825-1836, 2013
442013
Widespread genome transcription: new possibilities for RNA therapies
H Takahashi, P Carninci
Biochemical and biophysical research communications 452 (2), 294-301, 2014
432014
3′-Azido-2′,3′-dideoxynucleoside 5′-triphosphates inhibit telomerase activity in vitro , and the corresponding nucleosides cause telomere …
X Liu, H Takahashi, Y Harada, T Ogawara, Y Ogimura, Y Mizushina, ...
Nucleic acids research 35 (21), 7140-7149, 2007
432007
Characterization of piRNAs across postnatal development in mouse brain
Y Ghosheh, L Seridi, T Ryu, H Takahashi, V Orlando, P Carninci, T Ravasi
Scientific reports 6 (1), 25039, 2016
422016
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