Cellular Resistance Mechanisms to Targeted Protein Degradation Converge Toward Impairment of the Engaged Ubiquitin Transfer Pathway P Ottis, C Palladino, P Thienger, A Britschgi, C Heichinger, M Berrera, ... ACS chemical biology 14 (10), 2215-2223, 2019 | 114 | 2019 |
adegraphics: An S4 Lattice-Based Package for the Representation of Multivariate Data. A Siberchicot, A Julien-Laferrière, AB Dufour, J Thioulouse, S Dray R Journal 9 (2), 2017 | 50 | 2017 |
A combinatorial algorithm for microbial consortia synthetic design A Julien-Laferrière, L Bulteau, D Parrot, A Marchetti-Spaccamela, ... Scientific Reports 6 (1), 1-12, 2016 | 29 | 2016 |
BacHBerry: BACterial Hosts for production of Bioactive phenolics from bERRY fruits A Dudnik, AF Almeida, R Andrade, B Avila, P Bañados, D Barbay, ... Phytochemistry Reviews 17 (2), 291-326, 2018 | 25 | 2018 |
Besca, a single-cell transcriptomics analysis toolkit to accelerate translational research SC Mädler, A Julien-Laferriere, L Wyss, M Phan, A Sonrel, ASW Kang, ... NAR genomics and bioinformatics 3 (4), lqab102, 2021 | 17 | 2021 |
Behavioural evidence for a visual and proprioceptive control of head roll in hoverflies (Episyrphus balteatus) R Goulard, A Julien-Laferriere, J Fleuriet, JL Vercher, S Viollet Journal of Experimental Biology 218 (23), 3777-3787, 2015 | 17 | 2015 |
OptPipe-a pipeline for optimizing metabolic engineering targets A Hartmann, A Vila-Santa, N Kallscheuer, M Vogt, A Julien-Laferrière, ... BMC systems biology 11 (1), 1-9, 2017 | 16 | 2017 |
Vanucizumab mode of action: Serial biomarkers in plasma, tumor, and skin-wound-healing biopsies F Heil, G Babitzki, A Julien-Laferriere, CH Ooi, M Hidalgo, C Massard, ... Translational Oncology 14 (2), 100984, 2021 | 10 | 2021 |
adegraphics: An S4 Lattice-based package for the representation of multivariate data S Dray, A Siberchicot, J Thioulouse, A Julien-Laferrière URL https://github. com/sdray/adegraphics, r package version, 1.0-4, 2015 | 10 | 2015 |
Models and algorithms applied to metabolism: From revealing the responses to perturbations towards the design of microbial consortia A Julien-Laferriere Université de Lyon, 2016 | 4 | 2016 |
MassBlast: A workflow to accelerate RNA-seq and DNA database analysis A Veríssimo, JE Bassard, A Julien-Laferrière, MF Sagot, S Vinga bioRxiv, 131953, 2017 | 3 | 2017 |
The adegraphics package A Julien-Laferriere, A Siberchicot, S Dray | 3 | 2015 |
Charting the Heterogeneity of Colorectal Cancer Consensus Molecular Subtypes using Spatial Transcriptomics A Valdeolivas, B Amberg, N Giroud, M Richardson, EJC Gálvez, S Badillo, ... bioRxiv, 2023.01. 23.525135, 2023 | 2 | 2023 |
Totoro: Identifying active reactions during the transient state for metabolic perturbations MG Ferrarini, I Ziska, R Andrade, A Julien-Laferrière, L Duchemin, ... Frontiers in genetics 13, 2022 | 1 | 2022 |
Visualisation de données multivariées: réimplémentation des fonctionnalités graphiques de la librairie ade4 A Julien-Laferriere, S Dray 1ères Rencontres R, 2012 | 1 | 2012 |
Multipus: conception de communautés microbiennes pour la production de composés d’intérêt A Julien-Laferrière, L Bulteau, D Parrot, A Marchetti-Spaccamela, ... JOURNÉES OUVERTES DE BIOLOGIE INFORMATIQUE & MATHÉMATIQUES, 226, 2016 | | 2016 |
New developments in KisSplice: Combining local and global transcriptome assemblers to decipher splicing in RNA-seq data A Julien-Laferriere, G Sacomoto, R Chikhi, E Scaon, D Parsons, MF Sagot, ... Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM), 2013 | | 2013 |
Visualisation de données multivariées: réimplémentation des fonctionnalités graphiques du package ade4 A Julien-Laferriere, S Dray | | 2012 |
A Combinatorial Algorithm for Microbial Consortia Synthetic Design (Supplementary Material) A Julien-Laferriere, L Bulteau, D Parrot, A Marchetti-Spaccamela, ... | | |