Bioconda: sustainable and comprehensive software distribution for the life sciences B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ... Nature methods 15 (7), 475-476, 2018 | 1039 | 2018 |
Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome VJ Carrión, J Perez-Jaramillo, V Cordovez, V Tracanna, M De Hollander, ... Science 366 (6465), 606-612, 2019 | 777 | 2019 |
Soil networks become more connected and take up more carbon as nature restoration progresses E Morriën, SE Hannula, LB Snoek, NR Helmsing, H Zweers, ... Nature communications 8 (1), 14349, 2017 | 687 | 2017 |
Influence of resistance breeding in common bean on rhizosphere microbiome composition and function LW Mendes, JM Raaijmakers, M de Hollander, R Mendes, SM Tsai The ISME journal 12 (1), 212-224, 2018 | 361 | 2018 |
Linking rhizosphere microbiome composition of wild and domesticated Phaseolus vulgaris to genotypic and root phenotypic traits JE Pérez-Jaramillo, VJ Carrión, M Bosse, LFV Ferrão, M De Hollander, ... The ISME journal 11 (10), 2244-2257, 2017 | 336 | 2017 |
Soil-borne microbiome: linking diversity to function LW Mendes, SM Tsai, AA Navarrete, M De Hollander, JA van Veen, ... Microbial ecology 70, 255-265, 2015 | 323 | 2015 |
Soil microbiome is more heterogeneous in organic than in conventional farming system M Lupatini, GW Korthals, M De Hollander, TKS Janssens, EE Kuramae Frontiers in microbiology 7, 2064, 2017 | 313 | 2017 |
Acidobacterial community responses to agricultural management of soybean in Amazon forest soils AA Navarrete, EE Kuramae, M de Hollander, AS Pijl, JA van Veen, ... FEMS microbiology ecology 83 (3), 607-621, 2013 | 271 | 2013 |
Impact of long-term N, P, K, and NPK fertilization on the composition and potential functions of the bacterial community in grassland soil Y Pan, N Cassman, M de Hollander, LW Mendes, H Korevaar, ... FEMS microbiology ecology 90 (1), 195-205, 2014 | 245 | 2014 |
The wild side of plant microbiomes JE Pérez-Jaramillo, VJ Carrión, M de Hollander, JM Raaijmakers Microbiome 6, 1-6, 2018 | 237 | 2018 |
Functional traits dominate the diversity-related selection of bacterial communities in the rhizosphere Y Yan, EE Kuramae, M de Hollander, PGL Klinkhamer, JA van Veen The ISME journal 11 (1), 56-66, 2017 | 230 | 2017 |
Differential responses of soil bacteria, fungi, archaea and protists to plant species richness and plant functional group identity S Dassen, R Cortois, H Martens, M de Hollander, GA Kowalchuk, ... Molecular Ecology 26 (15), 4085-4098, 2017 | 217 | 2017 |
Shifts in rhizosphere fungal community during secondary succession following abandonment from agriculture SE Hannula, E Morriën, M de Hollander, WH Van Der Putten, ... The ISME journal 11 (10), 2294-2304, 2017 | 209 | 2017 |
A comparison of rpoB and 16S rRNA as markers in pyrosequencing studies of bacterial diversity M Vos, C Quince, AS Pijl, M de Hollander, GA Kowalchuk PloS one 7 (2), e30600, 2012 | 194 | 2012 |
Soil microbiome responses to the short‐term effects of Amazonian deforestation AA Navarrete, SM Tsai, LW Mendes, K Faust, M de Hollander, ... Molecular ecology 24 (10), 2433-2448, 2015 | 192 | 2015 |
Deciphering rhizosphere microbiome assembly of wild and modern common bean (Phaseolus vulgaris) in native and agricultural soils from Colombia JE Pérez-Jaramillo, M De Hollander, CA Ramírez, R Mendes, ... Microbiome 7, 1-16, 2019 | 169 | 2019 |
Detecting macroecological patterns in bacterial communities across independent studies of global soils KS Ramirez, CG Knight, M De Hollander, FQ Brearley, B Constantinides, ... Nature microbiology 3 (2), 189-196, 2018 | 158 | 2018 |
Plant and soil fungal but not soil bacterial communities are linked in long-term fertilized grassland NA Cassman, MFA Leite, Y Pan, M De Hollander, JA Van Veen, ... Scientific reports 6 (1), 23680, 2016 | 141 | 2016 |
Cultivation-independent and cultivation-dependent metagenomes reveal genetic and enzymatic potential of microbial community involved in the degradation of a complex microbial … OYA Costa, M De Hollander, A Pijl, B Liu, EE Kuramae Microbiome 8, 1-19, 2020 | 95 | 2020 |
Exploring soil microbial 16S rRNA sequence data to increase carbon yield and nitrogen efficiency of a bioenergy crop LM Pitombo, JB do Carmo, M De Hollander, R Rossetto, MV López, ... Gcb Bioenergy 8 (5), 867-879, 2016 | 88 | 2016 |