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Marcus Griffiths
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Deep machine learning provides state-of-the-art performance in image-based plant phenotyping
MP Pound, JA Atkinson, AJ Townsend, MH Wilson, M Griffiths, ...
Gigascience 6 (10), gix083, 2017
3302017
Phenotyping pipeline reveals major seedling root growth QTL in hexaploid wheat
JA Atkinson, LU Wingen, M Griffiths, MP Pound, O Gaju, MJ Foulkes, ...
Journal of Experimental Botany 66 (8), 2283-2292, 2015
2322015
Shaping 3D root system architecture
EC Morris, M Griffiths, A Golebiowska, S Mairhofer, J Burr-Hersey, T Goh, ...
Current Biology 27 (17), R919-R930, 2017
1932017
OpenSimRoot: widening the scope and application of root architectural models
JA Postma, C Kuppe, MR Owen, N Mellor, M Griffiths, MJ Bennett, ...
New Phytologist 215 (3), 1274-1286, 2017
1782017
RhizoVision Explorer: open-source software for root image analysis and measurement standardization
A Seethepalli, K Dhakal, M Griffiths, H Guo, GT Freschet, LM York
AoB plants 13 (6), plab056, 2021
1022021
RhizoVision crown: an integrated hardware and software platform for root crown phenotyping
A Seethepalli, H Guo, X Liu, M Griffiths, H Almtarfi, Z Li, S Liu, A Zare, ...
Plant Phenomics, 2020
832020
Targeting root ion uptake kinetics to increase plant productivity and nutrient use efficiency
M Griffiths, LM York
Plant Physiology 182 (4), 1854-1868, 2020
642020
Three Dimensional Root CT Segmentation using Multi-Resolution Encoder-Decoder Networks
MPP Mohammadreza Soltaninejad, Craig J Sturrock, Marcus Griffiths, Tony P ...
IEEE Transactions on Image Processing, 2020
392020
Functional phenomics and genetics of the root economics space in winter wheat using high‐throughput phenotyping of respiration and architecture
H Guo, H Ayalew, A Seethepalli, K Dhakal, M Griffiths, XF Ma, LM York
New Phytologist, 2021
352021
A multiple ion-uptake phenotyping platform reveals shared mechanisms affecting nutrient uptake by roots
M Griffiths, S Roy, H Guo, A Seethepalli, D Huhman, Y Ge, RE Sharp, ...
Plant physiology 185 (3), 781-795, 2021
352021
Optimisation of root traits to provide enhanced ecosystem services in agricultural systems: a focus on cover crops
M Griffiths, BM Delory, V Jawahir, KM Wong, G Cody Bagnall, TG Dowd, ...
Plant, Cell & Environment, 2022
322022
Combining semi-automated image analysis techniques with machine learning algorithms to accelerate large-scale genetic studies
JA Atkinson, G Lobet, M Noll, PE Meyer, M Griffiths, DM Wells
GigaScience 6 (10), gix084, 2017
282017
Iron–sulfur cluster protein NITROGEN FIXATION S-LIKE1 and its interactor FRATAXIN function in plant immunity
JP Fonseca, HK Lee, C Boschiero, M Griffiths, S Lee, P Zhao, LM York, ...
Plant Physiology 184 (3), 1532-1548, 2020
172020
Interactions among rooting traits for deep water and nitrogen uptake in upland and lowland ecotypes of switchgrass (Panicum virgatum L.)
M Griffiths, X Wang, K Dhakal, H Guo, A Seethepalli, Y Kang, LM York
Journal of Experimental Botany 73 (3), 967-979, 2022
142022
Application of synthetic peptide CEP1 increases nutrient uptake rates along plant roots
S Roy, M Griffiths, I Torres-Jerez, B Sanchez, E Antonelli, D Jain, N Krom, ...
Frontiers in Plant Science 12, 793145, 2022
122022
X‐ray CT reveals 4D root system development and lateral root responses to nitrate in soil
M Griffiths, N Mellor, CJ Sturrock, BS Atkinson, J Johnson, S Mairhofer, ...
The Plant Phenome Journal 5 (1), e20036, 2022
122022
Identification of QTL and underlying genes for root system architecture associated with nitrate nutrition in hexaploid wheat
M Griffiths, JA Atkinson, LJ Gardiner, R Swarup, MP Pound, MH Wilson, ...
Journal of Integrative Agriculture 21 (4), 917-932, 2022
10*2022
Whole-plant phenotypic engineering: moving beyond ratios for multi-objective optimization of nutrient use efficiency
LM York, M Griffiths, TMC Maaz
Current Opinion in Biotechnology 75, 102682, 2022
82022
A 3D print repository for plant phenomics
M Griffiths
Plant Phenomics 2020, 8640215, 2020
82020
A temporal analysis and response to nitrate availability of 3D root system architecture in diverse pennycress (Thlaspi arvense L.) accessions
M Griffiths, AE Liu, SL Gunn, NM Mutan, EY Morales, CN Topp
Frontiers in Plant Science 14, 1145389, 2023
22023
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Articles 1–20