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Michael E. Alfaro
Michael E. Alfaro
Verified email at ucla.edu - Homepage
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Cited by
Cited by
Year
Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence
ME Alfaro, S Zoller, F Lutzoni
Molecular biology and evolution 20 (2), 255-266, 2003
12472003
Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates
ME Alfaro, F Santini, C Brock, H Alamillo, A Dornburg, DL Rabosky, ...
Proceedings of the National Academy of Sciences 106 (32), 13410-13414, 2009
8982009
geiger v2. 0: an expanded suite of methods for fitting macroevolutionary models to phylogenetic trees
MW Pennell, JM Eastman, GJ Slater, JW Brown, JC Uyeda, RG FitzJohn, ...
Bioinformatics 30 (15), 2216-2218, 2014
7892014
Rates of speciation and morphological evolution are correlated across the largest vertebrate radiation
DL Rabosky, F Santini, J Eastman, SA Smith, B Sidlauskas, J Chang, ...
Nature communications 4 (1), 1958, 2013
6422013
An inverse latitudinal gradient in speciation rate for marine fishes
DL Rabosky, J Chang, PO Title, PF Cowman, L Sallan, M Friedman, ...
Nature 559 (7714), 392-395, 2018
6362018
Bayesian phylogenetic model selection using reversible jump Markov chain Monte Carlo
JP Huelsenbeck, B Larget, ME Alfaro
Molecular biology and evolution 21 (6), 1123-1133, 2004
5902004
Many-to-one mapping of form to function: a general principle in organismal design?
PC Wainwright, ME Alfaro, DI Bolnick, CD Hulsey
Integrative and comparative biology 45 (2), 256-262, 2005
4482005
Phylogenetic relationships and evolutionary history of the reef fish family Labridae
MW Westneat, ME Alfaro
Molecular phylogenetics and evolution 36 (2), 370-390, 2005
3642005
Did genome duplication drive the origin of teleosts? A comparative study of diversification in ray-finned fishes
F Santini, LJ Harmon, G Carnevale, ME Alfaro
BMC evolutionary biology 9, 1-15, 2009
3382009
Integrating fossils with molecular phylogenies improves inference of trait evolution
GJ Slater, LJ Harmon, ME Alfaro
Evolution 66 (12), 3931-3944, 2012
3372012
Evolutionary history of the parrotfishes: biogeography, ecomorphology, and comparative diversity
JT Streelman, M Alfaro, MW Westneat, DR Bellwood, SA Karl
Evolution 56 (5), 961-971, 2002
3282002
Diversity versus disparity and the radiation of modern cetaceans
GJ Slater, SA Price, F Santini, ME Alfaro
Proceedings of the Royal Society B: Biological Sciences 277 (1697), 3097-3104, 2010
3172010
A phylogenomic perspective on the radiation of ray-finned fishes based upon targeted sequencing of ultraconserved elements (UCEs)
BC Faircloth, L Sorenson, F Santini, ME Alfaro
PloS one 8 (6), e65923, 2013
3032013
Explosive Pleistocene range expansion leads to widespread Amazonian sympatry between robust and gracile capuchin monkeys
JW Lynch Alfaro, JP Boubli, LE Olson, A Di Fiore, B Wilson, ...
Journal of biogeography 39 (2), 272-288, 2012
2952012
A novel comparative method for identifying shifts in the rate of character evolution on trees
JM Eastman, ME Alfaro, P Joyce, AL Hipp, LJ Harmon
Evolution 65 (12), 3578-3589, 2011
2612011
Evolutionary consequences of many-to-one mapping of jaw morphology to mechanics in labrid fishes
ME Alfaro, DI Bolnick, PC Wainwright
The American Naturalist 165 (6), E140-E154, 2005
2472005
Diversification in vipers: Phylogenetic relationships, time of divergence and shifts in speciation rates
LRV Alencar, TB Quental, FG Grazziotin, ML Alfaro, M Martins, M Venzon, ...
Molecular phylogenetics and evolution 105, 50-62, 2016
2462016
Contemporaneous radiations of fungi and plants linked to symbiosis
F Lutzoni, MD Nowak, ME Alfaro, V Reeb, J Miadlikowska, M Krug, ...
Nature Communications 9 (1), 5451, 2018
2222018
The posterior and the prior in Bayesian phylogenetics
ME Alfaro, MT Holder
Annu. Rev. Ecol. Evol. Syst. 37, 19-42, 2006
2202006
Clade age and species richness are decoupled across the eukaryotic tree of life
DL Rabosky, GJ Slater, ME Alfaro
Public Library of Science 10 (8), e1001381, 2012
2182012
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