Michael C. Schatz

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Citations	51926	30580
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Fritz J SedlazeckHuman Genome Sequencing Center, Baylor College of Medicine, One Baylor Plaza, Houston TX 77030Verified email at bcm.edu
Maria NattestadOMGenomics LabsVerified email at google.com
Han FangGenAI, MetaVerified email at fb.com
Srividya RamakrishnanSenior Research Data Analyst, Schatz Lab , Johns Hopkins UniversityVerified email at jhu.edu
Melanie KirscheJohns Hopkins UniversityVerified email at jhu.edu
Michael AlongePh.D. Student, Johns Hopkins UniversityVerified email at jh.edu
Giuseppe NarzisiAssociate Director, Computational Biology, New York Genome CenterVerified email at nygenome.org
Sergey AganezovGenomic Applications at Oxford Nanopore Technologies, IncVerified email at nanoporetech.com
Sam KovakaJohns Hopkins UniversityVerified email at jhu.edu
Timothy Rhyker Ranallo-BenavidezTranslational Genomics Research InstituteVerified email at tgen.org
Shujun OuOhio State UniversityVerified email at osu.edu
Ruibang LuoComputer Science, University of Hong KongVerified email at cs.hku.hk
Robert AboukhalilBioinformatics Software EngineerVerified email at chanzuckerberg.com
Enis AfganResearch Scientist, Johns Hopkins UniversityVerified email at jhu.edu
Samantha ZarateRegeneron Genetics CenterVerified email at alumni.stanford.edu
Arun DasComputer Science PhD Student, Johns Hopkins UniversityVerified email at jhu.edu
Aysam Guerlerwww.guerler.orgVerified email at guerler.org
Stephen MosherJohns Hopkins UniversityVerified email at jhu.edu
Dannon BakerJohns Hopkins UniversityVerified email at jhu.edu

Michael C. Schatz

Bloomberg Distinguished Professor, Johns Hopkins University

Verified email at cs.jhu.edu - Homepage

Computer Science Computational Biology Bioinformatics Genomics Epigenomics


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The contribution of de novo coding mutations to autism spectrum disorder I Iossifov, BJ O'Roak, SJ Sanders, M Ronemus, N Krumm, D Levy, ... Nature 515, 216-21, 2014	2677	2014
Evolution of genes and genomes on the Drosophila phylogeny Nature 450 (7167), 203-218, 2007	2256	2007
The complete sequence of a human genome S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ... Science 376 (6588), 44-53, 2022	2205	2022
Phased diploid genome assembly with single-molecule real-time sequencing CS Chin, P Peluso, FJ Sedlazeck, M Nattestad, GT Concepcion, A Clum, ... Nature methods 13 (12), 1050-1054, 2016	1794	2016
Big data: astronomical or genomical? ZD Stephens, SY Lee, F Faghri, RH Campbell, C Zhai, MJ Efron, R Iyer, ... PLoS biology 13 (7), e1002195, 2015	1693	2015
De novo gene disruptions in children on the autistic spectrum I Iossifov, M Ronemus, D Levy, Z Wang, I Hakker, J Rosenbaum, ... Neuron 74 (2), 285-299, 2012	1687	2012
Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome AM Wenger, P Peluso, WJ Rowell, PC Chang, RJ Hall, GT Concepcion, ... Nature biotechnology 37 (10), 1155-1162, 2019	1422	2019
GenomeScope: fast reference-free genome profiling from short reads GW Vurture, FJ Sedlazeck, M Nattestad, CJ Underwood, H Fang, ... Bioinformatics 33 (14), 2202-2204, 2017	1381	2017
A whole-genome assembly of the domestic cow, Bos taurus AV Zimin, AL Delcher, L Florea, DR Kelley, MC Schatz, D Puiu, ... Genome biology 10, 1-10, 2009	1375	2009
Accurate detection of complex structural variations using single-molecule sequencing FJ Sedlazeck, P Rescheneder, M Smolka, H Fang, M Nattestad, ... Nature methods 15 (6), 461-468, 2018	1360	2018
Genome Sequence of Aedes aegypti, a Major Arbovirus Vector V Nene, JR Wortman, D Lawson, B Haas, C Kodira, Z Tu, B Loftus, Z Xi, ... Science 316 (5832), 1718-1723, 2007	1352	2007
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus) R Ming, S Hou, Y Feng, Q Yu, A Dionne-Laporte, JH Saw, P Senin, ... Nature, 991-996, 2008	1263	2008
KBase: the United States department of energy systems biology knowledgebase AP Arkin, RW Cottingham, CS Henry, NL Harris, RL Stevens, S Maslov, ... Nature biotechnology 36 (7), 566-569, 2018	1256	2018
Hybrid error correction and de novo assembly of single-molecule sequencing reads S Koren, MC Schatz, BP Walenz, J Martin, JT Howard, G Ganapathy, ... Nature biotechnology 30 (7), 693-700, 2012	1213	2012
Draft Genome Sequence of the Sexually Transmitted Pathogen Trichomonas vaginalis JM Carlton, RP Hirt, JC Silva, AL Delcher, M Schatz, Q Zhao, JR Wortman, ... Science 315 (5809), 207-212, 2007	1012	2007
CloudBurst: highly sensitive read mapping with MapReduce MC Schatz Bioinformatics 25 (11), 1363-1369, 2009	936	2009
GenomeScope 2.0 and Smudgeplot for reference-free profiling of polyploid genomes TR Ranallo-Benavidez, KS Jaron, MC Schatz Nature communications 11 (1), 1432, 2020	926	2020
GAGE: A critical evaluation of genome assemblies and assembly algorithms SL Salzberg, AM Phillippy, A Zimin, D Puiu, T Magoc, S Koren, ... Genome research 22 (3), 557-567, 2012	893	2012
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ... Gigascience 2 (1), 2047-217X-2-10, 2013	810	2013
The advantages of SMRT sequencing RJ Roberts, MO Carneiro, MC Schatz Genome biology 14, 1-4, 2013	738	2013

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